We use cookies to understand how you use our site and to improve your experience. This includes personalizing content and advertising. To learn more, click here. By continuing to use our site, you accept our use of cookies. Cookie Policy.

Features Partner Sites Information LinkXpress hp
Sign In
Advertise with Us
LGC Clinical Diagnostics

Download Mobile App





Unique Competition Focuses on Using Data Science to Forecast Preanalytical Errors

By LabMedica International staff writers
Posted on 27 Jul 2023
Print article
Image: The AACC session, “Data Analytics Competition: Forecasting Future Preanalytical Errors” looked at the challenge of hemolyzed samples (Photo courtesy of Freepix)
Image: The AACC session, “Data Analytics Competition: Forecasting Future Preanalytical Errors” looked at the challenge of hemolyzed samples (Photo courtesy of Freepix)

Many institutions grapple with the issue of excess hemolyzed samples and are keen to understand how to address this problem while preserving scarce resources. The AACC session titled "Data Analytics Competition: Forecasting Future Preanalytical Errors" focused on this very issue.

At the session, Mark Zaydman, MD, Ph.D., from Washington University in St. Louis (WUSTL, St. Louis, MO, USA) announced the winners of a unique competition focused on utilizing data science to predict preanalytical errors arising from incorrect blood specimen collection. The session highlighted the lessons that medical lab professionals could learn from this competition. Co-hosted by the Section of Pathology Informatics of Washington University in St. Louis and the ADLM Data Analytics Steering Committee, the competition used a machine-learning and data-science platform called Kaggle to crowdsource solutions for problems across disciplines.

The competition for this year, titled "Help with Hemolysis," provided a real-world, anonymized dataset reflecting hemolysis within the clinical lab. Contestants had to use this dataset to determine which blood-specimen collectors could gain the most from training in phlebotomy best practices. The idea was to discover ways to reduce in vitro hemolysis while effectively using laboratory time and resources. The winning solution could guide institutions on how to better allocate their training resources. While educational interventions can help reduce hemolysis, they can be expensive and temporary, especially with a high staff turnover. A total of 18 participating teams had slightly over a month to work with the provided dataset before submitting their solution and also had to submit their code to demonstrate their problem-solving approach.

After providing an overview of the competition and summarizing the strategies adopted by the teams, Zaydman announced the winning team—Team Hemolyers. The winning team then shared their solution, offering attendees the opportunity to learn more about them, their approach to the problem, and ask any questions. The session's innovative teaching style differed from the conventional lecture format, aiming to cater to individuals of varying levels of experience. The format of the competition, which is into its second year, provided a novel way to learn, foster a collaborative community, and discover powerful solutions for real-world problems. Zaydman who had hosted the first competition as well pointed out that interdisciplinary teams—combining clinical lab expertise and computer-science knowledge—had been the winners both the times. This was mainly attributed to the increasing accessibility of data science tools and computational resources to individuals without advanced data science degrees. Such interdisciplinary teams can identify gaps in patient care and collaborate to develop innovative and viable solutions.

Despite the particular difficulty of the task for this year's competition, Zaydman stressed that the results were remarkable. “A valuable model doesn’t have to be perfect, as long as it saves costs and improves patient care,” he said.

Related Links:
WUSTL

New
Gold Member
ANA & ENA Screening Assays
ANA and ENA Assays
Gold Member
Turnkey Packaging Solution
HLX
New
Gold Member
Pharmacogenetics Panel
VeriDose Core Panel v2.0
New
Moxifloxacin Resistance Assay
Allplex MG & MoxiR Assay

Print article

Channels

Molecular Diagnostics

view channel
Image: This joint effort will use samples from KU ADRC research to validate a blood test developed by BYU (Photo courtesy of KU ADRC)

Blood Test for Early Alzheimer’s Detection Could Help Slow Disease Progression

When brain cells, such as those affected by Alzheimer’s disease, die, small fragments of DNA are released into the bloodstream. These fragments, known as cell-free DNA, carry valuable information, including... Read more

Hematology

view channel
Image: Personalized blood count could lead to early intervention for common diseases (Photo courtesy of 123RF)

Personalized CBC Testing Could Help Diagnose Early-Stage Diseases in Healthy Individuals

A complete blood count (CBC) screening is a standard examination most physicians request for healthy adults. This test is essential for evaluating a patient’s overall health with a single blood sample.... Read more

Immunology

view channel
Image: Concept for the device. Memory B cells able to bind influenza virus remain stuck to channels despite shear forces (Photo courtesy of Steven George/UC Davis)

Microfluidic Chip-Based Device to Measure Viral Immunity

Each winter, a new variant of influenza emerges, posing a challenge for immunity. People who have previously been infected or vaccinated against the flu may have some level of protection, but how well... Read more

Microbiology

view channel
Image: The BIOFIRE® FILMARRAY® Tropical Fever Panel has received U.S. FDA Special 510(k) clearance (Photo courtesy of bioMérieux)

Syndromic PCR Test Rapidly and Accurately Identifies Pathogens in Patients with Tropical Fever Infections

Tropical fevers refer to infections that are common in, or unique to, tropical and subtropical regions. As these diseases spread to previously unaffected areas and can be brought in by travelers, infections... Read more

Pathology

view channel
Image: These images show the high resolution achieved with the new microscopy technique (Photo courtesy of Cao, R. et al. Science Advance, 2024. Caltech)

New Microscopy Technique Enables Rapid Tumor Analysis by Surgeons in OR

The current standard method for quickly sampling and imaging tissue during surgery involves taking a biopsy, freezing the sample, staining it to enhance visibility, and slicing it into thin sections that... Read more

Technology

view channel
Image: Human tear film protein sampling methods (Photo courtesy of Clinical Proteomics. 2024 Mar 13;21:23. doi: 10.1186/s12014-024-09475-8)

New Lens Method Analyzes Tears for Early Disease Detection

Bodily fluids, including tears and saliva, carry proteins that are released from different parts of the body. The presence of specific proteins in these biofluids can be a sign of health issues.... Read more
Copyright © 2000-2024 Globetech Media. All rights reserved.